Annotating Your Experimental Data workshop
Material for the Annotating Your Experimental Data workshop, 28 April 2020.
Webinar slides have been archived at Zenodo.
Go to https://nanocommons.github.io/workshops/2020-04-28/
- Spreadsheet Annotation
- First hack round
- A Demo Spreadsheet
- Exercise 1: Browsing the eNanoMapper ontology with BioPortal
- Annotating the columns
- Exercise 2: Use BioPortal to find matching ontology terms
- Annotating the values
- Exercise 3: Use BioPortal to find matching ontology terms
- Annotating the value units
- Second hack round
- Your Own Data
- Step 1: what are the key concepts in your data?
- Step 2: how can your data be made more uniform?
- Plenary Step 3: Joint Group Reflection/Summary
- Make your Research Findable
- Literature and keyword annotation
- Searching in Scholia
- Linking your article in Wikidata to ‘main subjects’
- Make your data more findable
- Announcing your data with the EU NanoSafety Cluster
- Creating an nanosafety data set in RDF
- Info about you
- Info about your nanomaterial
- Adding the size of your material
- Linking the particle to your article
- Uploading the RDF to the OpenRiskNet cloud
Acknowledgments
This workshop is based on an earlier workshop
held within OpenRiskNet with funding from European Commission within Horizon2020
EINFRA-22-2016 Programme under grant agreement nº 731075,
but continued by and for NanoCommons with funding from European Union Horizon 2020 Programme (H2020)
under grant agreement nº 731032,
NanoSolveIT with funding from the European Union Horizon 2020 Programme (H2020)
under grant agreement nº 814572,
and Scholia with funding from the Alfred P. Sloan Foundation under
grant agreement G-2019-11458.
Copyright 2019-2020 (C) Egon Willighagen - CC-BY Int. 4.0